STRUCTURE ALIGNMENT



  1C8R:A    3/8     RPEWIWLALGTALMGLGTLYFLVKGMGVSDPDAKKFYAITTLVPAIAFTMYLSMLLGYGL
  1JGJ:A    3/4     -GLTTLFWLGAIGMLVGTLAFAWAGRDA-GSGERRYYVTLVGISGIAAVAYAVMALGVGW
  1SR1:_    5/6     --ATAYLGGAVALIVGVAFVWLLYRSLDGS-PHQSALAPLAIIPVFAGLSYVGMAYDIGT
  2ASR:_            ------------------------------------------------------------
  1ET3:S   26/194   VGYSVSLASLTVAVLI---LAYFRRLHCTR---NYIHMHLFLSFMLRAVSIFVKDAV--L
  1BZ4:A            ------------------------------------------------------------



  1C8R:A   63/68    ---------------------------TMVPFGGEQNPI--YWARYADWLFTTPLLLLNL
  1JGJ:A   61/62    ---------------------------VPVA----ERTV--FVPRYIDWILTTPLIVYFL
  1SR1:_   62/#13   ---------------------------VIV------NGNQIVGLRYIDWLVTTPILVGYV
  2ASR:_            ------------------------------------------------------------
  1ET3:S   78/246   YSGATLDEAERLTEEELRAIAQAPPPPATA------AAG--YAGCRVAVTFFLYFLATNY
  1BZ4:A    2/24    -------------------------------------GQ--RWELALGRFWDYLRWVQTL



  1C8R:A   94/99    ---ALLVDA---------------DQGTILALVGADGIMIGTGLVGALT---------KV
  1JGJ:A   88/89    ---GLLAGL---------------DSREFGIVITLNTVVMLAGFAGAMV---------PG
  1SR1:_   89/90    ---GYAAGA---------------SRRSIIGVMVADALMIAVGAGAVVT---------DG
  2ASR:_    9/47    ------LRE---------------QQGELTSTWDLMLQTRINLSRSAVRMMMDSSNQQSN
  1ET3:S  130/298   ---Y----WILVEGLYLHSLIFMAFFSEKKYLWGFTVFGWGLPAVFVAV---------WV
  1BZ4:A   23/45    SEQVQEELL---------------S--SQVTQELRALMDETMKELKAYK---------SE



  1C8R:A  127/132   ------------------------Y----------------SYRFVWWAISTAAMLYILY
  1JGJ:A  121/122   -----------------------------------------IERYALFGMGAVAFIGLVY
  1SR1:_  122/#24   ------------------------T----------------LKWA-LFGVSSIFHLSLFA
  2ASR:_   48/86    ------------------------------------------AKVELLDSARKTLAQAAT
  1ET3:S  174/342   SVRATLANTGCWDLSSGNKKWIIQV----------------PILASIVLNFILFINIVRV
  1BZ4:A   57/79    ------------------------LEEQLTPVAEETRARLSKELQAAQARLGADMEDVCG



  1C8R:A  147/152   VLFF----G--F------SM------RPEVASTFKVLRNVTVVLWSAYPVVWLIGSEGAG
  1JGJ:A  140/141   YLVG----P--MTESAS-QR------SSGIKSLYVRLRNLTVVLWAIYPFIWLLGPPGVA
  1SR1:_  141/142   YLYVIFPRV--V------PD------VPEQIGLFNLLKNHIGLLWLAYPLVWLFGPAGIG
  2ASR:_   66/104   HYKK----FKSM------AP------LPEMVATSRNIDEKYKNYYTALTELIDYLDYGNT
  1ET3:S  218/386   LATK----L--R------ETNAGRCDTRQQYRKLLKSTLVLMPLFGVHYIV---------
  1BZ4:A   93/115   RLVQ----Y--RGEVQAMLG------QSTEELRVRLASHLRKLRKRLLRDADDLQKRLAV



  1C8R:A  189/199   IV----------------------PLNIETLLFMVLDVSAKVGFGLILLRSRAIFG
  1JGJ:A  187/188   LL----------------------TPTVDVALIVYLDLVTKVGFGFIALDA-----
  1SR1:_  187/#42   EA----------------------TAAGVALTYVFLDVLAKVPYVYFFYA------
  2ASR:_  110/148   GA----------------------Y---FAQPTQGMQNAMGERFAQYAL--SSEKL
  1ET3:S  257/425   -FMATPYTEVSGTLWQVQMHYEMLFNSFQGFFVAIIYCFCNGEVQAE---------
  1BZ4:A            --------------------------------------------------------

1JGJ:A 

1.0 29.3
208 7.2
1SR1:_ 

1.9 28.7
204 6.6


2.1 24.8
202 -1.0
2ASR:_ 

4.3 8.4
119 5.3


4.3 7.9
114 -1.0


4.1 7.1
113 -1.0
1ET3:S 

3.2 9.3
183 5.2


3.2 5.0
180 -1.0


3.5 6.7
180 -1.0


5.1 3.0
100 -1.0
1BZ4:A 

4.5 7.0
114 5.2


4.7 10.2
118 -1.0


4.5 6.2
113 -1.0


5.4 8.0
88 -1.0


4.8 3.0
101 -1.0
1C8R:A 1JGJ:A 1SR1:_ 2ASR:_ 1ET3:S
Each cell in distance matrix provides: 

RMSD(Å) Sequence identity(%)
Length of alignment Z-score

SEQUENCE ALIGNMENT (CLUSTALW)

 

 


                       1JGJ_A          --------------------MVGLTTLFWLGAIGMLVGTLAFAWAGR---DAGSGERRYY 37
                       1SR1__          --------------------MDAVATAYLGGAVALIVG-VAFVWLLYRS-LDGSPHQSAL 38
                       1C8R_A          ---------------------TGRPEWIWLALGTALMGLGTLYFLVKGMGVSDPDAKKFY 39
                       1ET3_S          SECVKFLTNETREREVFDRLGMIYTVGYSVSLASLTVAVLILAYFRRLHCTRNYIHMHLF 60
                       1BZ4_A          -----------------------SGQRWELALG------RFWDYLRWVQTLSEQVQEELL 31
                                                                     .      .     :

                       1JGJ_A          VTLVGISGIAAVAYAVMALGVG-----------WVPVAE----RTVFVPRYIDWILTTPL 82
                       1SR1__          APLAIIPVFAGLSYVGMAYDIG-----------TVIVNG----NQIVGLRYIDWLVTTPI 83
                       1C8R_A          AITTLVPAIAFTMYLSMLLGYG-----------LTMVPFGGEQNPIYWARYADWLFTTPL 88
                       1ET3_S          LSFMLRAVSIFVKDAVLYSGATLDEAERLTEEELRAIAQAPPPPATAAAGYAGCRVAVTF 120
                       1BZ4_A          SSQVTQELRALMDETMKELKAY-------------------------------------- 53
                                                                                           .   : .

                       1JGJ_A          IVYFLG------LLAGLDSREFGIVITLNT-------VVMLAGFAGAMVPG-IERYALFG 128
                       1SR1__          LVGYVG------YAAGASRRSIIGVMVADA-------LMIAVGAGAVVTDG-TLKWALFG 129
                       1C8R_A          LLLNLA------LLVDADQGTILALVGADG-------IMIGTGLVGALTKVYSYRFVWWA 135
                       1ET3_S          FLYFLATNYYWILVEGLYLHSLIFMAFFSEKKYLWGFTVFGWGLPAVFVAVWVSVRATLA 180
                       1BZ4_A          ----------------------------------------KSELEEQLTPVAEETRARLS 73
                                            .         .            .                  ..       .  .

                       1JGJ_A          -----------------MGAVAFIGLVYYLVGPMTESASQRSSGIKS-LYVRLRNLTVVL 170
                       1SR1__          -----------------VSSIFHLSLFAYLYVIFPRVVPDVPEQIG--LFNLLKNHIGLL 170
                       1C8R_A          -----------------ISTAAMLYILYVLFFGFSMRP-----EVAS-TFKVLRNVTVVL 172
                       1ET3_S          NTGCWDLSSGNKKWIIQVPILASIVLNFILFINIVRVLATKLRETNAGRCDTRQQYRKLL 240
                       1BZ4_A          -----------------------------------KELQAAQARLGADMEDVCGRLVQYR 98
                                                                                             .

                       1JGJ_A          WAIYPFIWLLGPPGVALLTPTVDVALIVYLDLVTKVGFGFIALDAAA------------- 217
                       1SR1__          WLAYPLVWLFGPAGIGEATAAGVALTYVFLDVLAKVPYVYFFYARRRVFMHSESPPAPEQ 230
                       1C8R_A          WSAYPVVWLIGSEGAGIVPLNIETLLFMVLDVSAKVGFGLILLRSRAIFG---------- 222
                       1ET3_S          KSTLVLMPLFGVHYIVFMATPYTEVSGTLWQVQMHYEMLFNSFQGFFVAIIYCFCNGEVQ 300
                       1BZ4_A          GEVQAMLGQSTEELRVRLASHLRKLRKRLLRDADDLQKRLAVYQAG-------------- 144
                                            .:           .               .                     .  .

                       1JGJ_A          ---------
                       1SR1__          ATVEATAAD 239
                       1C8R_A          ---------
                       1ET3_S          AE------- 302
                       1BZ4_A          ---------
                                       :  .::::.