Structure Alignment - 1QJC:A Neighbors

Sequence alignment based on assembled pairwise structure alignments between 1QJC:A and its neighbors. Light color indicates not-aligned residues in structural neighbors. Position numbers according to sequence (starting from 1) and according to PDB are given as SSSS/PPPP, SSSS - sequence, PPPP - PDB. 




  1QJC:A    1/3     QKRAIYPGTFDPITNGHIDIVTRATQMFDHVILAIAASPSKKPMFTLEERVALAQQATAH
  1B6T:A    2/3     QKRAIYPGTFDPITNGHIDIVTRATQMFDHVILAIAASPSKKPMFTLEERVALAQQATAH
  1QJC:B    1/3     QKRAIYPGTFDPITNGHIDIVTRATQMFDHVILAIAASPSKKPMFTLEERVALAQQATAH
  1B6T:B    2/3     QKRAIYPGTFDPITNGHIDIVTRATQMFDHVILAIAASPSKKPMFTLEERVALAQQATAH


  1QJC:A   61/63    LGNVEVVGFSDLMANFARNQHATVLIRGLRAVADFEYEMQLAHMNRHLMPELESVFLMPS
  1B6T:A   62/63    LGNVEVVGFSDLMANFARNQHATVLIRGLRAVADFEYEMQLAHMNRHLMPELESVFLMPS
  1QJC:B   61/63    LGNVEVVGFSDLMANFARNQHATVLIRGLRAVADFEYEMQLAHMNRHLMPELESVFLMPS
  1B6T:B   62/63    LGNVEVVGFSDLMANFARNQHATVLIRGLRAVADFEYEMQLAHMNRHLMPELESVFLMPS


  1QJC:A  121/123   KEWSFISSSLVKEVARHQGDVTHFLPENVHQALMAKLA
  1B6T:A  122/123   KEWSFISSSLVKEVARHQGDVTHFLPENVHQALMAKLA
  1QJC:B  121/123   KEWSFISSSLVKEVARHQGDVTHFLPENVHQALMAKLA
  1B6T:B  122/123   KEWSFISSSLVKEVARHQGDVTHFLPENVHQALMAKLA
1B6T:A
0.3100.0
1587.0
1QJC:B
1.0100.0
1586.9
1.1100.0
158-1.0
1B6T:B
1.0100.0
1586.9
1.1100.0
158-1.0
0.2100.0
158-1.0
1QJC:A 1B6T:A 1QJC:B

Each cell in distance matrix provides:
RMSD(Å) Sequence identity(%)
Length of alignment Z-score



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